STRINGSTRING
DVU_2693 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2693" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2693Uncharacterized protein; Identified by Glimmer2; putative (79 aa)    
Predicted Functional Partners:
DVU_2694
Uncharacterized protein; Identified by Glimmer2; putative (144 aa)
              0.604
DVU_2696
Uncharacterized protein; Identified by similarity to OMNI-NMB1083 (162 aa)
              0.602
DVU_2695
annotation not available (138 aa)
              0.602
DVU_2692
annotation not available (78 aa)
              0.597
DVU_2691
Uncharacterized protein; Identified by Glimmer2; putative (177 aa)
              0.591
DVU_2697
Uncharacterized protein; Identified by Glimmer2; putative (112 aa)
              0.586
DVU_2700
Uncharacterized protein; Identified by Glimmer2; putative (139 aa)
              0.401
DVU_2699
Transglycosylase SLT domain protein; Identified by match to protein family HMM PF01464 (215 aa)
              0.401
DVU_2698
annotation not available (120 aa)
              0.401
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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