Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2772Conserved hypothetical protein; Identified by similarity to OMNI:NTL01TE2295. (440 aa)    
Predicted Functional Partners:
DVU_2939
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01TE1240.
  
 0.969
DVU_1062
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SS02998.
 
  
 0.939
DVU_3036
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SS01164; match to protein family HMM PF04015.
 
    0.709
cbiM
Cobalamin biosynthesis protein CbiM; Identified by match to protein family HMM PF01891.
 
    0.678
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
 
      0.615
DVU_3268
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01MK0862.
 
    0.539
DVU_2773
Membrane protein, putative; Identified by similarity to OMNI:NTL01TT1359; match to protein family HMM PF02588.
  
    0.485
DVU_2774
CBS domain protein/ACT domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01842.
       0.431
DVU_2436
Conserved hypothetical protein; Identified by similarity to OMNI:AF1432.
    
   0.415
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.