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DVU_2786 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2786" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2786Uncharacterized protein; Identified by Glimmer2; putative (32 aa)    
Predicted Functional Partners:
DVU_2785
Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392 (237 aa)
              0.837
DVU_2784
Dehydrogenase, FMN-dependent family; Identified by match to protein family HMM PF01070 (341 aa)
              0.538
DVU_2783
Probable membrane transporter protein; Identified by match to protein family HMM PF01925 (266 aa)
              0.538
DVU_2782
Uncharacterized protein; Identified by Glimmer2; putative (54 aa)
              0.538
DVU_2787
Conserved domain protein; Identified by similarity to OMNI-NTL01NS2107 (152 aa)
              0.516
DVU_2788
Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022 (120 aa)
              0.495
DVU_2781
Uncharacterized protein; Identified by Glimmer2; putative (188 aa)
              0.402
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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