DVU_2805 protein (Desulfovibrio vulgaris Hildenborough)

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Score

DVU_2805

Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492. (383 aa)

Predicted Functional Partners:

rpsN

0.849

folE2

0.839

map

0.824

DVU_2806

0.802

DVU_2807

0.797

DVU_2808

0.744

rpmB

0.729

DVU_1343

0.723

DVU_0102

0.696

DVU_0039

0.673

Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVU_0039	DVU_2805	DVU_0039	DVU_2805	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	0.673
DVU_0102	DVU_1343	DVU_0102	DVU_1343	Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297.	Cation ABC transporter, periplasmc-binding protein; Identified by match to protein family HMM PF01297.	0.916
DVU_0102	DVU_2805	DVU_0102	DVU_2805	Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297.	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	0.696
DVU_0102	rpmB	DVU_0102	DVU_1211	Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297.	Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.652
DVU_0102	rpsN	DVU_0102	DVU_1316	Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.660
DVU_1343	DVU_0102	DVU_1343	DVU_0102	Cation ABC transporter, periplasmc-binding protein; Identified by match to protein family HMM PF01297.	Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297.	0.916
DVU_1343	DVU_2805	DVU_1343	DVU_2805	Cation ABC transporter, periplasmc-binding protein; Identified by match to protein family HMM PF01297.	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	0.723
DVU_1343	rpmB	DVU_1343	DVU_1211	Cation ABC transporter, periplasmc-binding protein; Identified by match to protein family HMM PF01297.	Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.652
DVU_1343	rpsN	DVU_1343	DVU_1316	Cation ABC transporter, periplasmc-binding protein; Identified by match to protein family HMM PF01297.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.660
DVU_2805	DVU_0039	DVU_2805	DVU_0039	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	0.673
DVU_2805	DVU_0102	DVU_2805	DVU_0102	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297.	0.696
DVU_2805	DVU_1343	DVU_2805	DVU_1343	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	Cation ABC transporter, periplasmc-binding protein; Identified by match to protein family HMM PF01297.	0.723
DVU_2805	DVU_2806	DVU_2805	DVU_2806	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	0.802
DVU_2805	DVU_2807	DVU_2805	DVU_2807	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	0.797
DVU_2805	DVU_2808	DVU_2805	DVU_2808	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	TonB domain protein; Identified by similarity to GP:17982262; match to protein family HMM TIGR01352.	0.744
DVU_2805	folE2	DVU_2805	DVU_2892	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	Conserved hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate.	0.839
DVU_2805	map	DVU_2805	DVU_1324	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	0.824
DVU_2805	rpmB	DVU_2805	DVU_1211	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.729
DVU_2805	rpsN	DVU_2805	DVU_1316	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.849
DVU_2806	DVU_2805	DVU_2806	DVU_2805	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	Cobalamin synthesis protein/P47K family; Identified by match to protein family HMM PF02492.	0.802

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