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DVU_2818 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2818" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2818Uncharacterized protein; Identified by Glimmer2; putative (72 aa)    
Predicted Functional Partners:
DVU_2817
Multidrug resistance protein; Identified by similarity to SP-P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (417 aa)
              0.622
DVU_2816
Efflux pump membrane transporter; Identified by similarity to SP-P31224; match to protein family HMM PF00873; match to protein family HMM TIGR00915 (1070 aa)
              0.602
DVU_2815
Outer membrane efflux protein; Identified by similarity to SP-Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845 (536 aa)
              0.586
DVU_2819
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440 (202 aa)
              0.559
DVU_2814
Uncharacterized protein; Identified by Glimmer2; putative (57 aa)
              0.528
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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