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DVU_2820 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2820" - Identified by match to protein family HMM PF04909 in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2820Identified by match to protein family HMM PF04909 (278 aa)    
Predicted Functional Partners:
DVU_2821
Uncharacterized protein; Identified by Glimmer2; putative (73 aa)
              0.845
DVU_2824
Formate acetyltransferase; Identified by match to protein family HMM PF01228; match to protein family HMM PF02901 (828 aa)
   
     
  0.697
DVU_2823
TRAP transporter, DctMQ subunit; Identified by similarity to GP-12722118; match to protein family HMM PF00597; match to protein family HMM PF04290; match to protein family HMM TIGR00786 (591 aa)
         
  0.528
DVU_1690
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440 (189 aa)
 
          0.424
DVU_2827
Sigma-54 dependent transcriptional regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM TIGR00229; match to protein family HMM TIGR01199 (473 aa)
         
  0.423
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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