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DVU_2843 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2843" - Very short patch repair endonuclease in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2843Very short patch repair endonuclease; May nick specific sequences that contain T-G mispairs resulting from m5C-deamination (136 aa)    
Predicted Functional Partners:
DVU_1746
Cytosine-specific methyltransferase; Identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family (369 aa)
   
  0.975
DVU_2842
Cytosine-specific methyltransferase; Identified by similarity to SP-P11876; match to protein family HMM PF00145; match to protein family HMM TIGR00675 (358 aa)
 
   
  0.971
DVU_2841
Type II restriction endonuclease, putative; Identified by similarity to SP-P14633 (399 aa)
 
     
  0.910
DVU_2846
Uncharacterized protein; Identified by Glimmer2; putative (57 aa)
              0.801
DVU_2845
HIT family protein; Identified by similarity to SP-O07513; match to protein family HMM PF01230 (142 aa)
              0.801
DVU_2844
Uncharacterized protein; Identified by Glimmer2; putative (287 aa)
              0.801
DVU_1747
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM TIGR01369 (981 aa)
 
 
  0.798
DVU_1515
Cytosine-specific methyltransferase; Identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675 (487 aa)
 
   
  0.794
mutT
Mutator mutT protein; Identified by similarity to SP-P08337; match to protein family HMM PF00293; Belongs to the Nudix hydrolase family (129 aa)
       
  0.778
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (744 aa)
   
 
  0.691
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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