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DVU_2844 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2844" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2844Uncharacterized protein; Identified by Glimmer2; putative (287 aa)    
Predicted Functional Partners:
DVU_2846
Uncharacterized protein; Identified by Glimmer2; putative (57 aa)
              0.845
DVU_2845
HIT family protein; Identified by similarity to SP-O07513; match to protein family HMM PF01230 (142 aa)
              0.845
DVU_2843
Very short patch repair endonuclease; May nick specific sequences that contain T-G mispairs resulting from m5C-deamination (136 aa)
              0.801
DVU_2842
Cytosine-specific methyltransferase; Identified by similarity to SP-P11876; match to protein family HMM PF00145; match to protein family HMM TIGR00675 (358 aa)
              0.798
DVU_2841
Type II restriction endonuclease, putative; Identified by similarity to SP-P14633 (399 aa)
              0.546
DVU_2840
Uncharacterized protein; Identified by similarity to OMNI-VCA0483 (233 aa)
              0.546
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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