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DVU_2877 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2877" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2877Uncharacterized protein; Identified by Glimmer2; putative (240 aa)    
Predicted Functional Partners:
DVU_2878
Methyltransferase; Identified by match to protein family HMM PF01555; match to protein family HMM PF02195; Belongs to the N(4)/N(6)-methyltransferase family (452 aa)
              0.849
DVU_2876
Terminase, large subunit, putative; Identified by similarity to GP-13361094 (628 aa)
              0.605
DVU_2875
DNA-binding domain, excisionase family; Identified by match to protein family HMM TIGR01764 (72 aa)
              0.594
DVU_2874
Uncharacterized protein; Identified by Glimmer2; putative (142 aa)
              0.589
DVU_2879
Uncharacterized protein; Identified by similarity to OMNI-CC3049 (518 aa)
              0.556
DVU_2880
Identified by Glimmer2; putative (42 aa)
              0.406
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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