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DVU_2890 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2890" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2890annotation not available (292 aa)    
Predicted Functional Partners:
nikR
Putative nickel-responsive regulator; Transcriptional regulator (139 aa)
              0.847
folE2
GTP cyclohydrolase FolE2; Converts GTP to 7,8-dihydroneopterin triphosphate (264 aa)
              0.838
DVU_2893
Flagellar basal-body rod protein, putative; Identified by similarity to SP-P75935; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family (125 aa)
              0.661
DVU_2889
Identified by match to protein family HMM PF02632 (182 aa)
              0.626
DVU_2888
Cobalt ABC transporter, ATP-binding protein, putative; Identified by similarity to SP-Q05596; match to protein family HMM PF00005 (275 aa)
              0.625
DVU_0638
Membrane protein, putative; Identified by similarity to OMNI-CT0045 (288 aa)
   
          0.442
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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