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nikR protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"nikR" - Putative nickel-responsive regulator in Desulfovibrio vulgaris Hildenborough
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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nikRPutative nickel-responsive regulator; Transcriptional regulator (139 aa)    
Predicted Functional Partners:
folE2
GTP cyclohydrolase FolE2; Converts GTP to 7,8-dihydroneopterin triphosphate (264 aa)
              0.876
DVU_2890
annotation not available (292 aa)
              0.847
DVU_2893
Flagellar basal-body rod protein, putative; Identified by similarity to SP-P75935; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family (125 aa)
              0.699
DVU_2888
Cobalt ABC transporter, ATP-binding protein, putative; Identified by similarity to SP-Q05596; match to protein family HMM PF00005 (275 aa)
         
  0.631
DVU_1509
Uncharacterized protein; Identified by similarity to GP-21913207 (129 aa)
   
 
  0.627
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5’-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) (357 aa)
           
  0.606
cobM
Precorrin-4 C11-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465 (257 aa)
         
  0.595
DVU_2889
Identified by match to protein family HMM PF02632 (182 aa)
              0.588
cobS
Adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5’-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5’-phosphate; Belongs to the CobS family (245 aa)
           
  0.561
cbiD
Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A (389 aa)
           
  0.560
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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