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DVU_2898 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2898" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
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Cooccurence
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Experiments
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[Homology]
Score
DVU_2898Uncharacterized protein; Identified by similarity to OMNI-NTL01MM1125 (333 aa)    
Predicted Functional Partners:
DVU_1266
Uncharacterized protein; Identified by Glimmer2; putative (1145 aa)
   
          0.784
DVU_1545
Hemolysin-type calcium-binding repeat/calx-beta domain protein; Identified by match to protein family HMM PF00353; match to protein family HMM PF03160; match to protein family HMM TIGR01612 (2414 aa)
   
          0.783
DVU_3165
Conserved domain protein; Identified by similarity to GP-19886751 (286 aa)
   
          0.774
DVU_1523
Uncharacterized protein; Identified by Glimmer2; putative (342 aa)
   
          0.762
DVU_2263
Outer membrane autotransporter barrel domain protein; Identified by match to protein family HMM PF03797; match to protein family HMM TIGR01414 (641 aa)
   
          0.761
DVU_1490
annotation not available (932 aa)
   
          0.759
DVU_1524
Uncharacterized protein; Identified by similarity to GP-13491641 (298 aa)
   
          0.754
DVU_1486
annotation not available (770 aa)
   
          0.744
DVU_1547
Sensory box protein; Identified by match to protein family HMM PF00785; match to protein family HMM TIGR00229 (541 aa)
   
          0.738
DVU_3287
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (677 aa)
   
          0.736
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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