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DVU_2899 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2899" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2899Uncharacterized protein; Identified by Glimmer2; putative (286 aa)    
Predicted Functional Partners:
DVU_1410
Conserved domain protein; Identified by similarity to OMNI-NT01MC3424 (290 aa)
 
          0.827
DVU_0455
Uncharacterized protein; Identified by Glimmer2; putative (255 aa)
 
        0.776
DVU_2596
Uncharacterized protein; Identified by Glimmer2; putative (259 aa)
   
          0.763
DVU_0244
Uncharacterized protein; Identified by Glimmer2; putative (285 aa)
   
          0.763
DVU_2604
Uncharacterized protein; Identified by similarity to GP-13186164 (569 aa)
   
          0.759
DVU_1721
Uncharacterized protein; Identified by Glimmer2; putative (550 aa)
   
          0.756
DVU_1537
Lipoprotein, putative; Identified by match to protein family HMM PF03938 (188 aa)
   
     
  0.754
DVU_3186
Uncharacterized protein; Identified by Glimmer2; putative (273 aa)
   
          0.750
DVU_1714
Uncharacterized protein; Identified by similarity to GP-13186158 (697 aa)
   
          0.746
DVU_0005
annotation not available (261 aa)
 
          0.744
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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