STRINGSTRING
DVU_2971 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2971" - Glycosyl transferase, family 8 in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2971Glycosyl transferase, family 8; Identified by match to protein family HMM PF01501 (303 aa)    
Predicted Functional Partners:
DVU_0351
Identified by similarity to SP-P39627; similar to GP-4741793 (544 aa)
 
          0.805
DVU_3186
Uncharacterized protein; Identified by Glimmer2; putative (273 aa)
   
          0.776
DVU_3172
Uncharacterized protein; Identified by Glimmer2; putative (715 aa)
   
          0.769
DVU_2810
Formate dehydrogenase formation protein FdhE, putative; Necessary for formate dehydrogenase activity (277 aa)
   
          0.758
DVU_1545
Hemolysin-type calcium-binding repeat/calx-beta domain protein; Identified by match to protein family HMM PF00353; match to protein family HMM PF03160; match to protein family HMM TIGR01612 (2414 aa)
   
          0.732
DVU_1410
Conserved domain protein; Identified by similarity to OMNI-NT01MC3424 (290 aa)
 
   
  0.714
DVU_1359
Uncharacterized protein; Identified by Glimmer2; putative (427 aa)
   
          0.709
DVU_1266
Uncharacterized protein; Identified by Glimmer2; putative (1145 aa)
   
          0.702
DVU_2898
Uncharacterized protein; Identified by similarity to OMNI-NTL01MM1125 (333 aa)
   
          0.691
DVU_3171
Cytochrome c3; Participates in sulfate respiration coupled with phosphorylation by transferring electrons from the enzyme dehydrogenase to ferredoxin (129 aa)
   
          0.670
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (18%) [HD]