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pspC protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"pspC" - Phage shock protein C in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
pspCPhage shock protein C; Identified by similarity to SP-P23855; match to protein family HMM PF04024 (140 aa)    
Predicted Functional Partners:
pspA
Identified by match to protein family HMM PF04012 (221 aa)
 
 
  0.993
DVU_2987
Uncharacterized protein; Identified by Glimmer2; putative (99 aa)
              0.845
pspF
Psp operon transcriptional activator; Identified by similarity to SP-P37344; match to protein family HMM PF00158; match to protein family HMM TIGR01199 (381 aa)
 
          0.580
DVU_2441
Heat shock protein, Hsp20 family; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family (136 aa)
         
  0.544
DVU_2442
Heat shock protein, Hsp20 family; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family (117 aa)
         
  0.543
DVU_3062
Histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 (1080 aa)
       
 
  0.542
DVU_2412
Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229 (1035 aa)
       
 
  0.542
DVU_2578
Response regulator; Identified by match to protein family HMM PF00072 (229 aa)
       
      0.541
DVU_0302
Chemotaxis protein CheX, putative; Identified by similarity to GP-3493637 (155 aa)
   
          0.529
DVU_3022
Sensory box histidine kinase/response regulator; Identified by similarity to OMNI-NTL01SMA00507; match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229 (1139 aa)
   
 
      0.517
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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