Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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DVU_2995Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534. (387 aa)    
Predicted Functional Partners:
DVU_2997
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.797
DVU_2996
Identified by match to protein family HMM PF01370.
 
  
 0.639
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.568
DVU_0938
Isoamylase N-terminal domain protein.
   
 0.566
DVU_2349
Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094.
  
 
 0.480
DVU_2998
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.477
DVU_0074
Polysaccharide biosynthesis domain protein; Identified by similarity to SP:P39631.
 
  
 0.463
DVU_2999
methionyl-tRNA formyltransferase, putative; Identified by match to protein family HMM PF00551.
  
  
 0.451
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.450
DVU_0346
Membrane protein, putative.
  
  
 0.446
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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