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DVU_3028 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3028" - Iron-sulfur cluster-binding protein in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
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Cooccurence
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Experiments
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[Homology]
Score
DVU_3028Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754 (422 aa)    
Predicted Functional Partners:
glcD
Glycolate oxidase, subunit GlcD; Identified by similarity to SP-P52075; match to protein family HMM PF01565; match to protein family HMM PF02913 (461 aa)
 
  0.996
DVU_3032
Uncharacterized protein; Identified by similarity to OMNI-HP0137; match to protein family HMM PF02589 (209 aa)
 
  0.976
DVU_3033
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754 (717 aa)
 
 
0.947
DVU_0827
Glycolate oxidase, subunit GlcD, putative; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913 (471 aa)
 
  0.941
DVU_1412
D-isomer specific 2-hydroxyacid dehydrogenase family protein; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family (326 aa)
       
  0.911
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily (729 aa)
   
 
  0.910
DVU_3121
Aminotransferase, class V; Identified by match to protein family HMM PF00266 (376 aa)
       
    0.903
DVU_1358
Hydrolase, haloacid dehalogenase-like family; Identified by match to protein family HMM PF00702 (215 aa)
       
    0.900
DVU_0130
Phosphoglycolate phosphatase, putative; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549 (220 aa)
       
    0.900
DVU_1781
Uncharacterized protein; Identified by similarity to OMNI-NTL01NM01533; match to protein family HMM PF02589 (221 aa)
 
   
  0.871
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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