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DVU_3077 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3077" - Identified by match to protein family HMM PF00578 in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
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Cooccurence
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[Homology]
Score
DVU_3077Identified by match to protein family HMM PF00578 (253 aa)    
Predicted Functional Partners:
trpC
Indole-3-glycerol phosphate synthase; Identified by match to protein family HMM PF00218 (257 aa)
   
 
    0.911
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate (257 aa)
       
    0.903
trpB-2
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine; Belongs to the TrpB family (395 aa)
       
    0.902
trpB-1
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (414 aa)
       
    0.902
DVU_2247
Antioxidant, AhpC/Tsa family; Identified by match to protein family HMM PF00578 (204 aa)
 
 
0.778
rpmI
50S ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family (65 aa)
   
        0.688
DVU_2932
Uncharacterized protein; Identified by similarity to OMNI-NTL03ST2282; match to protein family HMM TIGR01777 (308 aa)
   
        0.681
rpmE
50S ribosomal protein L31; Binds the 23S rRNA (71 aa)
     
        0.642
DVU_0283
AhpF family protein/thioredoxin reductase; Identified by similarity to SP-P80880; match to protein family HMM PF00070; match to protein family HMM TIGR01292; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (661 aa)
 
   
  0.553
DVU_3007
Uncharacterized protein; Identified by Glimmer2; putative (407 aa)
     
 
  0.527
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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