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DVU_3079 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3079" - Identified by match to protein family HMM PF00903 in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_3079Identified by match to protein family HMM PF00903 (200 aa)    
Predicted Functional Partners:
DVU_3078
Uncharacterized protein; Identified by Glimmer2; putative (70 aa)
              0.618
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
   
  0.578
DVU_0742
Uncharacterized protein; Identified by Glimmer2; putative (278 aa)
   
          0.571
poR
Pyruvate synthase; Identified by similarity to GP-1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855 (1215 aa)
         
  0.561
DVU_1933
Peptidase, PfpI family; Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382 (173 aa)
   
 
  0.555
DVU_0995
Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382 (195 aa)
   
 
  0.555
DVU_2127
Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092 (420 aa)
   
     
  0.554
DVU_1658
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily (215 aa)
   
 
  0.547
pncA
Pyrazinamidase/nicotinamidase; Identified by similarity to SP-P21369; match to protein family HMM PF00857 (206 aa)
 
   
  0.529
DVU_2495
Identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369 (177 aa)
 
        0.528
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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