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DVU_3111 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3111" - Transcriptional regulator, Crp/Fnr family in Desulfovibrio vulgaris Hildenborough
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second shell of interactors
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filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
DVU_3111Transcriptional regulator, Crp/Fnr family; Identified by match to protein family HMM PF00027; match to protein family HMM PF00325 (244 aa)    
Predicted Functional Partners:
DVU_2547
Transcriptional regulator, putative; Identified by match to protein family HMM PF00027 (228 aa)
   
     
  0.767
DVU_3112
TPR domain protein; Identified by match to protein family HMM PF00515 (267 aa)
   
 
  0.746
DVU_2097
Transcriptional regulator, putative; Identified by similarity to SP-P03019; match to protein family HMM PF00027 (223 aa)
           
  0.727
DVU_3109
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037 (66 aa)
 
     
  0.690
DVU_0449
Protein-glutamate methylesterase; Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR (1513 aa)
   
 
  0.613
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1385 aa)
       
 
  0.610
DVU_2760
Uncharacterized protein; Identified by Glimmer2; putative (203 aa)
   
 
  0.596
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (347 aa)
     
      0.576
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth; Belongs to the sigma-70 factor family. RpoD/SigA subfamily (590 aa)
     
 
  0.569
DVU_1584
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (356 aa)
     
 
  0.569
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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