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DVU_3119 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3119" - Identified by match to protein family HMM PF00501 in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_3119Identified by match to protein family HMM PF00501 (564 aa)    
Predicted Functional Partners:
fadD
Long-chain-fatty-acid--CoA ligase; Identified by similarity to SP-P94547; match to protein family HMM PF00501 (564 aa)
 
 
0.913
DVU_2064
Oxidoreductase, 2-nitropropane dioxygenase family; Identified by match to protein family HMM PF03060 (373 aa)
   
        0.709
pheT
Phenylalanine--tRNA ligase beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472 (798 aa)
     
        0.662
DVU_3065
Identified by match to protein family HMM PF00501 (550 aa)
 
   
0.559
DVU_3118
Uncharacterized protein; Identified by similarity to OMNI-NTL03CP0853 (101 aa)
              0.545
DVU_2885
Alcohol dehydrogenase, iron-containing; Identified by similarity to GP-155577; match to protein family HMM PF00465 (397 aa)
   
   
  0.443
DVU_2545
Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465 (386 aa)
   
   
  0.443
DVU_2405
Alcohol dehydrogenase, iron-containing; Identified by similarity to GP-2393887; match to protein family HMM PF00465 (393 aa)
   
   
  0.443
DVU_2396
Alcohol dehydrogenase, iron-containing; Identified by similarity to SP-P31005; match to protein family HMM PF00465 (380 aa)
   
   
  0.443
DVU_0353
Alcohol dehydrogenase, iron-containing; Identified by match to protein family HMM PF00465 (357 aa)
   
   
  0.443
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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