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DVU_3123 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3123" - HD domain protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
DVU_3123HD domain protein; Identified by match to protein family HMM PF01966 (231 aa)    
Predicted Functional Partners:
DVU_0940
GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 (243 aa)
 
 
  0.869
DVU_3124
Uncharacterized protein; Identified by Glimmer2; putative (43 aa)
              0.845
DVU_0449
Protein-glutamate methylesterase; Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR (1513 aa)
   
 
  0.768
DVU_0416
GGDEF domain protein; Identified by similarity to GP-1119215; match to protein family HMM PF00990; match to protein family HMM TIGR00254 (372 aa)
 
 
  0.721
DVU_0636
Response regulator/GGDEF domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254 (437 aa)
 
  0.719
DVU_1862
GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 (331 aa)
 
 
  0.713
DVU_3068
GAF domain/sensory box/EAL domain protein; Identified by match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254 (827 aa)
 
 
  0.618
DVU_2432
Sensory box/GGDEF domain/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254 (1413 aa)
 
   
  0.603
DVU_3238
Response regulator; Identified by match to protein family HMM PF00072 (134 aa)
            0.593
DVU_3106
GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 (655 aa)
 
 
  0.582
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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