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DVU_3130 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3130" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_3130Uncharacterized protein; Identified by Glimmer2; putative (70 aa)    
Predicted Functional Partners:
DVU_3354
Uncharacterized protein; Identified by Glimmer2; putative (45 aa)
           
  0.718
DVU_1006
Uncharacterized protein; Identified by Glimmer2; putative (149 aa)
           
  0.714
DVU_3129
Uncharacterized protein; Identified by Glimmer2; putative (55 aa)
              0.616
DVU_3128
Lipoprotein, putative; Identified by similarity to OMNI-NTL03PA04964; match to protein family HMM PF03886 (205 aa)
              0.596
pqiB
Paraquat-inducible protein B; Identified by similarity to SP-P43671 (543 aa)
              0.596
DVU_3132
Glycerol-3-phosphate dehydrogenase; Identified by similarity to SP-P18158; match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family (546 aa)
              0.483
DVU_3131
Transcriptional regulator, putative; Identified by match to protein family HMM PF04198 (315 aa)
              0.483
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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