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DVU_3143 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3143" - Iron-sulfur cluster-binding protein in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_3143Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM TIGR01409 (529 aa)    
Predicted Functional Partners:
fdnG-3
Formate dehydrogenase 2 subunit alpha (cytochrome c-553); Alpha chain of the formate dehydrogenase (FDH) that catalyzes the reversible two-electron oxidation of formate to carbon dioxide. The alpha subunit of formate dehydrogenase forms the active site (1012 aa)
 
 
  0.937
fdnG-2
Formate dehydrogenase, alpha subunit, selenocysteine-containing; Selenoprotein; identified by similarity to SP-P24183; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; match to protein family HMM TIGR01553; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family (1003 aa)
 
 
  0.932
fdnG-1
Formate dehydrogenase, alpha subunit, selenocysteine-containing; Selenoprotein; identified by similarity to SP-P24183; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; match to protein family HMM TIGR01553 (1005 aa)
 
 
  0.930
DVU_3145
Hydrogenase, b-type cytochrome subunit, putative; Identified by match to protein family HMM PF01292 (202 aa)
 
        0.842
DVU_3144
annotation not available (542 aa)
 
          0.839
DVU_1614
Iron-sulfur cluster-binding protein; Identified by similarity to SP-P30132; match to protein family HMM PF00037 (176 aa)
   
          0.767
cooF
Iron-sulfur protein CooF; Identified by similarity to SP-P31894; match to protein family HMM PF00037 (173 aa)
   
     
  0.711
DVU_1286
Reductase, transmembrane subunit, putative; Identified by match to protein family HMM PF03916 (387 aa)
 
 
  0.648
hydC
[Fe] hydrogenase gamma; Identified by similarity to GP-40828; match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF02256; match to protein family HMM PF02906 (606 aa)
   
 
  0.648
DVU_0577
Formate dehydrogenase formation protein FdhE, putative; Necessary for formate dehydrogenase activity (293 aa)
 
 
 
  0.645
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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