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DVU_3162 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3162" - ABC transporter, periplasmic substrate-binding protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
DVU_3162ABC transporter, periplasmic substrate-binding protein; Identified by similarity to SP-P10904; match to protein family HMM PF01547 (431 aa)    
Predicted Functional Partners:
DVU_3164
ABC transporter, permease protein; Identified by similarity to OMNI-TM0598; match to protein family HMM PF00528 (277 aa)
 
  0.996
DVU_3163
ABC transporter, permease protein; Identified by similarity to OMNI-NTL01LI0216; match to protein family HMM PF00528 (293 aa)
  0.993
DVU_3161
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily (349 aa)
  0.985
DVU_3165
Conserved domain protein; Identified by similarity to GP-19886751 (286 aa)
 
          0.682
DVU_0291
ABC transporter, ATP-binding protein; Identified by similarity to SP-P16676; match to protein family HMM PF00005 (354 aa)
 
 
  0.606
potA
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family (368 aa)
 
 
  0.606
modC
Molybdenum ABC transporter, ATP-binding protein; Identified by similarity to SP-P37732; match to protein family HMM PF00005 (253 aa)
 
 
  0.601
DVU_3166
annotation not available (218 aa)
              0.501
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Identified by similarity to SP-P37606; match to protein family HMM PF01210 (330 aa)
         
  0.459
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (663 aa)
     
      0.456
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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