STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
annotation not available (218 aa)
Predicted Functional Partners:
ABC transporter, permease protein; Identified by similarity to OMNI-NTL01LI0216; match to protein family HMM PF00528 (293 aa)
ABC transporter, permease protein; Identified by similarity to OMNI-TM0598; match to protein family HMM PF00528 (277 aa)
Conserved domain protein; Identified by similarity to GP-19886751 (286 aa)
Heme biosynthesis protein, putative; Identified by similarity to SP-Q52522 (160 aa)
ABC transporter, periplasmic substrate-binding protein; Identified by similarity to SP-P10904; match to protein family HMM PF01547 (431 aa)
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily (349 aa)
Glutamate-1-semialdehyde 2,1-aminomutase; Identified by similarity to SP-P30949; match to protein family HMM PF00202; match to protein family HMM TIGR00713; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily (423 aa)
5-nitroimidazole antibiotic resistance protein, putative; Identified by similarity to GP-435265 (155 aa)
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882 Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough