DVU_3167 protein (Desulfovibrio vulgaris Hildenborough)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVU_0734	DVU_0854	DVU_0734	DVU_0854	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	NirD protein, putative; Identified by similarity to SP:Q52522.	0.560
DVU_0734	DVU_0855	DVU_0734	DVU_0855	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.531
DVU_0734	DVU_0857	DVU_0734	DVU_0857	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.637
DVU_0734	DVU_3004	DVU_0734	DVU_3004	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.446
DVU_0734	DVU_3167	DVU_0734	DVU_3167	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	Heme biosynthesis protein, putative; Identified by similarity to SP:Q52522.	0.577
DVU_0734	hemL	DVU_0734	DVU_3168	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	Glutamate-1-semialdehyde-2,1-aminomutase; Identified by similarity to SP:P30949; match to protein family HMM PF00202; match to protein family HMM TIGR00713; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.	0.896
DVU_0734	putA	DVU_0734	DVU_3319	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.	0.430
DVU_0854	DVU_0734	DVU_0854	DVU_0734	NirD protein, putative; Identified by similarity to SP:Q52522.	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	0.560
DVU_0854	DVU_0855	DVU_0854	DVU_0855	NirD protein, putative; Identified by similarity to SP:Q52522.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.996
DVU_0854	DVU_0857	DVU_0854	DVU_0857	NirD protein, putative; Identified by similarity to SP:Q52522.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.996
DVU_0854	DVU_2012	DVU_0854	DVU_2012	NirD protein, putative; Identified by similarity to SP:Q52522.	Hypothetical protein; Identified by Glimmer2; putative.	0.491
DVU_0854	DVU_3004	DVU_0854	DVU_3004	NirD protein, putative; Identified by similarity to SP:Q52522.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.477
DVU_0854	DVU_3167	DVU_0854	DVU_3167	NirD protein, putative; Identified by similarity to SP:Q52522.	Heme biosynthesis protein, putative; Identified by similarity to SP:Q52522.	0.998
DVU_0854	putA	DVU_0854	DVU_3319	NirD protein, putative; Identified by similarity to SP:Q52522.	Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.	0.551
DVU_0855	DVU_0734	DVU_0855	DVU_0734	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	0.531
DVU_0855	DVU_0854	DVU_0855	DVU_0854	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	NirD protein, putative; Identified by similarity to SP:Q52522.	0.996
DVU_0855	DVU_0857	DVU_0855	DVU_0857	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.976
DVU_0855	DVU_2012	DVU_0855	DVU_2012	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	Hypothetical protein; Identified by Glimmer2; putative.	0.423
DVU_0855	DVU_3004	DVU_0855	DVU_3004	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.549
DVU_0855	DVU_3167	DVU_0855	DVU_3167	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	Heme biosynthesis protein, putative; Identified by similarity to SP:Q52522.	0.926

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