Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_1422 | DVU_2770 | DVU_1422 | DVU_2770 | Identified by match to protein family HMM PF00691. | Response regulator; Identified by match to protein family HMM PF00072. | 0.611 |
| DVU_1422 | aprB | DVU_1422 | DVU_0846 | Identified by match to protein family HMM PF00691. | Adenylylsulphate reductase, beta subunit; Identified by similarity to GP:7109234; match to protein family HMM PF00037; match to protein family HMM TIGR02060. | 0.737 |
| DVU_1422 | hup-4 | DVU_1422 | DVU_3187 | Identified by match to protein family HMM PF00691. | DNA-binding protein HU; Identified by similarity to SP:P02341; similar to SP:P08821; similar to GP:14028719; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | 0.752 |
| DVU_1422 | rbO | DVU_1422 | DVU_3183 | Identified by match to protein family HMM PF00691. | Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity; Belongs to the desulfoferrodoxin family. | 0.841 |
| DVU_1568 | rbO | DVU_1568 | DVU_3183 | Ferritin; Iron-storage protein. | Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity; Belongs to the desulfoferrodoxin family. | 0.873 |
| DVU_1568 | rdl | DVU_1568 | DVU_3093 | Ferritin; Iron-storage protein. | Identified by match to protein family HMM PF00301; Belongs to the rubredoxin family. | 0.533 |
| DVU_1568 | rub | DVU_1568 | DVU_3184 | Ferritin; Iron-storage protein. | Rubredoxin; Rubredoxin is a small nonheme, iron protein lacking acid- labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule. | 0.567 |
| DVU_2770 | DVU_1422 | DVU_2770 | DVU_1422 | Response regulator; Identified by match to protein family HMM PF00072. | Identified by match to protein family HMM PF00691. | 0.611 |
| DVU_2770 | dcrA | DVU_2770 | DVU_3182 | Response regulator; Identified by match to protein family HMM PF00072. | Methyl-accepting chemotaxis protein DcrA; Identified by similarity to SP:P35841; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF00785; match to protein family HMM TIGR00229. | 0.692 |
| DVU_2770 | rbO | DVU_2770 | DVU_3183 | Response regulator; Identified by match to protein family HMM PF00072. | Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity; Belongs to the desulfoferrodoxin family. | 0.697 |
| aprB | DVU_1422 | DVU_0846 | DVU_1422 | Adenylylsulphate reductase, beta subunit; Identified by similarity to GP:7109234; match to protein family HMM PF00037; match to protein family HMM TIGR02060. | Identified by match to protein family HMM PF00691. | 0.737 |
| aprB | rbO | DVU_0846 | DVU_3183 | Adenylylsulphate reductase, beta subunit; Identified by similarity to GP:7109234; match to protein family HMM PF00037; match to protein family HMM TIGR02060. | Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity; Belongs to the desulfoferrodoxin family. | 0.697 |
| dcrA | DVU_2770 | DVU_3182 | DVU_2770 | Methyl-accepting chemotaxis protein DcrA; Identified by similarity to SP:P35841; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF00785; match to protein family HMM TIGR00229. | Response regulator; Identified by match to protein family HMM PF00072. | 0.692 |
| dcrA | rbO | DVU_3182 | DVU_3183 | Methyl-accepting chemotaxis protein DcrA; Identified by similarity to SP:P35841; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF00785; match to protein family HMM TIGR00229. | Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity; Belongs to the desulfoferrodoxin family. | 0.811 |
| hup-4 | DVU_1422 | DVU_3187 | DVU_1422 | DNA-binding protein HU; Identified by similarity to SP:P02341; similar to SP:P08821; similar to GP:14028719; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | Identified by match to protein family HMM PF00691. | 0.752 |
| hup-4 | rbO | DVU_3187 | DVU_3183 | DNA-binding protein HU; Identified by similarity to SP:P02341; similar to SP:P08821; similar to GP:14028719; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family. | Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity; Belongs to the desulfoferrodoxin family. | 0.748 |
| rbO | DVU_1422 | DVU_3183 | DVU_1422 | Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity; Belongs to the desulfoferrodoxin family. | Identified by match to protein family HMM PF00691. | 0.841 |
| rbO | DVU_1568 | DVU_3183 | DVU_1568 | Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity; Belongs to the desulfoferrodoxin family. | Ferritin; Iron-storage protein. | 0.873 |
| rbO | DVU_2770 | DVU_3183 | DVU_2770 | Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity; Belongs to the desulfoferrodoxin family. | Response regulator; Identified by match to protein family HMM PF00072. | 0.697 |
| rbO | aprB | DVU_3183 | DVU_0846 | Desulfoferrodoxin; Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity; Belongs to the desulfoferrodoxin family. | Adenylylsulphate reductase, beta subunit; Identified by similarity to GP:7109234; match to protein family HMM PF00037; match to protein family HMM TIGR02060. | 0.697 |
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