STRINGSTRING
DVU_3190 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3190" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_3190Uncharacterized protein; Identified by Glimmer2; putative (555 aa)    
Predicted Functional Partners:
DVU_1045
Uncharacterized protein; Identified by Glimmer2; putative (198 aa)
   
        0.785
DVU_1039
annotation not available (213 aa)
   
          0.779
DVU_1589
Uncharacterized protein; Identified by Glimmer2; putative (262 aa)
   
          0.778
DVU_1194
Uncharacterized protein; Identified by Glimmer2; putative (368 aa)
   
          0.778
DVU_0859
Uncharacterized protein; Identified by Glimmer2; putative (491 aa)
   
          0.778
DVU_0799
Uncharacterized protein; Identified by similarity to GP-21899254 (466 aa)
   
          0.778
DVU_0371
Uncharacterized protein; Identified by similarity to GP-21899254 (474 aa)
   
          0.778
DVU_0772
Uncharacterized protein; Identified by Glimmer2; putative (115 aa)
   
          0.776
DVU_1875
DafA protein; Identified by similarity to SP-P77527 (105 aa)
   
          0.775
DVU_1842
annotation not available (318 aa)
   
          0.775
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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