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DVU_3201 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3201" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
DVU_3201Uncharacterized protein; Identified by Glimmer2; putative (353 aa)    
Predicted Functional Partners:
DVU_3112
TPR domain protein; Identified by match to protein family HMM PF00515 (267 aa)
   
      0.801
DVU_0756
TPR domain protein; Identified by match to protein family HMM PF00515 (237 aa)
   
      0.787
DVU_0294
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (714 aa)
   
      0.786
DVU_2992
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (538 aa)
 
 
  0.775
DVU_2261
Uncharacterized protein; Identified by Glimmer2; putative (604 aa)
 
        0.774
DVU_1464
Identified by match to protein family HMM PF01075 (411 aa)
 
 
  0.768
DVU_2896
TPR domain protein; Identified by match to protein family HMM PF00515 (1076 aa)
   
      0.763
DVU_0584
Transposase, putative; Identified by similarity to OMNI-NTL01NM00438 (312 aa)
   
          0.757
DVU_0410
Uncharacterized protein; Identified by Glimmer2; putative (201 aa)
   
          0.749
DVU_2211
Uncharacterized protein; Identified by Glimmer2; putative (872 aa)
   
      0.746
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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