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fliA protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"fliA" - RNA polymerase sigma factor in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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Experiments
Databases
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[Homology]
Score
fliARNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (265 aa)    
Predicted Functional Partners:
flgM
Negative regulator of flagellin synthesis FlgM; Identified by similarity to SP-P39809; match to protein family HMM PF04316 (104 aa)
   
  0.991
flgC
Flagellar basal-body rod protein FlgC; Identified by similarity to SP-P75935; match to protein family HMM PF00460; match to protein family HMM TIGR01395; Belongs to the flagella basal body rod proteins family (145 aa)
 
 
  0.970
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin (703 aa)
 
   
  0.963
cheA-3
Chemotaxis protein CheA; Identified by similarity to SP-P29072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895 (1089 aa)
   
   
  0.951
cheA-2
Chemotaxis protein CheA; Identified by similarity to SP-P07363; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895 (697 aa)
   
   
  0.951
cheA-1
Chemotaxis protein CheA; Identified by similarity to SP-P07363; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895 (708 aa)
   
   
  0.951
DVU_3231
Flagellar biosynthesis protein FlhF, putative; Identified by similarity to SP-Q01960; match to protein family HMM PF00448 (365 aa)
 
   
  0.949
DVU_0862
Uncharacterized protein; Identified by similarity to SP-P26608; match to protein family HMM PF02561; match to protein family HMM TIGR00208 (301 aa)
 
   
  0.944
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body (136 aa)
 
 
  0.938
cheY-3
Chemotaxis protein CheY; Identified by similarity to SP-Q51455; match to protein family HMM PF00072 (126 aa)
   
 
  0.923
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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