DVU_3248 protein (Desulfovibrio vulgaris Hildenborough)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
DVU_0060	DVU_0061	Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Multidrug resistance protein, putative; Identified by similarity to GP:18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	0.997
DVU_0060	DVU_0062	Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND efflux system, outer membrane protein, NodT family; Identified by similarity to SP:Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845.	0.994
DVU_0060	DVU_2815	Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Outer membrane efflux protein; Identified by similarity to SP:Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845.	0.976
DVU_0060	DVU_2816	Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Multidrug resistance protein; Identified by similarity to SP:P31224; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	0.991
DVU_0060	DVU_2817	Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Multidrug resistance protein; Identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.915
DVU_0060	DVU_3097	Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.968
DVU_0060	DVU_3246	Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	RND efflux system, outer membrane protein, NodT family; Identified by similarity to GP:19716262; match to protein family HMM PF02321; match to protein family HMM TIGR01845.	0.869
DVU_0060	DVU_3248	Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	AcrB/AcrD/AcrF family protein; Identified by similarity to GP:1707645; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	0.990
DVU_0061	DVU_0060	Multidrug resistance protein, putative; Identified by similarity to GP:18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.997
DVU_0061	DVU_0062	Multidrug resistance protein, putative; Identified by similarity to GP:18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	RND efflux system, outer membrane protein, NodT family; Identified by similarity to SP:Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845.	0.998
DVU_0061	DVU_0437	Multidrug resistance protein, putative; Identified by similarity to GP:18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P76397; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.910
DVU_0061	DVU_2815	Multidrug resistance protein, putative; Identified by similarity to GP:18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	Outer membrane efflux protein; Identified by similarity to SP:Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845.	0.993
DVU_0061	DVU_2816	Multidrug resistance protein, putative; Identified by similarity to GP:18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	Multidrug resistance protein; Identified by similarity to SP:P31224; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	0.906
DVU_0061	DVU_2817	Multidrug resistance protein, putative; Identified by similarity to GP:18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	Multidrug resistance protein; Identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.992
DVU_0061	DVU_3097	Multidrug resistance protein, putative; Identified by similarity to GP:18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.960
DVU_0061	DVU_3246	Multidrug resistance protein, putative; Identified by similarity to GP:18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	RND efflux system, outer membrane protein, NodT family; Identified by similarity to GP:19716262; match to protein family HMM PF02321; match to protein family HMM TIGR01845.	0.884
DVU_0061	DVU_3247	Multidrug resistance protein, putative; Identified by similarity to GP:18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	Efflux transporter, RND family, MFP subunit; Identified by similarity to GP:1707644; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.910
DVU_0061	DVU_3248	Multidrug resistance protein, putative; Identified by similarity to GP:18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	AcrB/AcrD/AcrF family protein; Identified by similarity to GP:1707645; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	0.905
DVU_0062	DVU_0060	RND efflux system, outer membrane protein, NodT family; Identified by similarity to SP:Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845.	Efflux transporter, RND family, MFP subunit; Identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.994
DVU_0062	DVU_0061	RND efflux system, outer membrane protein, NodT family; Identified by similarity to SP:Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845.	Multidrug resistance protein, putative; Identified by similarity to GP:18496807; match to protein family HMM PF00873; match to protein family HMM TIGR00915.	0.998

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