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DVU_3255 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3255" - Transcriptional regulator, CopG family in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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DVU_3255Transcriptional regulator, CopG family; Identified by match to protein family HMM PF01402 (132 aa)    
Predicted Functional Partners:
DVU_3254
PDZ domain protein; Identified by match to protein family HMM PF00595 (454 aa)
         
  0.727
DVU_3253
Phenylacetate-coenzyme A ligase, putative; Identified by similarity to SP-P76085 (421 aa)
              0.723
DVU_1524
Uncharacterized protein; Identified by similarity to GP-13491641 (298 aa)
   
          0.683
DVU_0223
Uncharacterized protein; Identified by similarity to OMNI-NTL02MA0751 (60 aa)
     
 
  0.669
DVU_1266
Uncharacterized protein; Identified by Glimmer2; putative (1145 aa)
   
          0.629
DVU_2898
Uncharacterized protein; Identified by similarity to OMNI-NTL01MM1125 (333 aa)
   
          0.604
DVU_1104
annotation not available (243 aa)
   
          0.588
mutM
Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3’- and 5’-phosphates (365 aa)
              0.579
DVU_1490
annotation not available (932 aa)
   
          0.561
DVU_1111
Uncharacterized protein; Identified by Glimmer2; putative (561 aa)
   
          0.555
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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