Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0319 | DVU_3176 | DVU_0319 | DVU_3176 | Udp-n-acetylglucosamine/udp-n-acetylgalactosamine 4-epimerase; Identified by similarity to GP:20560072; match to protein family HMM PF01370 | Udp-n-acetyl-d-glucosamine/udp-n-acetyl-d-galactosamine dehydrogenase; Identified by similarity to SP:P39861; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721 | 0.995 |
| DVU_0319 | glmU | DVU_0319 | DVU_2668 | Udp-n-acetylglucosamine/udp-n-acetylgalactosamine 4-epimerase; Identified by similarity to GP:20560072; match to protein family HMM PF01370 | Bifunctional n-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain | 0.908 |
| DVU_0319 | lpxA | DVU_0319 | DVU_2367 | Udp-n-acetylglucosamine/udp-n-acetylgalactosamine 4-epimerase; Identified by similarity to GP:20560072; match to protein family HMM PF01370 | Acyl-(acyl-carrier-protein)--udp-n- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell | 0.809 |
| DVU_0319 | murA | DVU_0319 | DVU_3258 | Udp-n-acetylglucosamine/udp-n-acetylgalactosamine 4-epimerase; Identified by similarity to GP:20560072; match to protein family HMM PF01370 | Udp-n-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine | 0.908 |
| DVU_2505 | DVU_2510 | DVU_2505 | DVU_2510 | Cell cycle protein, ftsw/roda/spove family; Belongs to the SEDS family | Cell division protein ftsi (penicillin-binding protein 3); Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717 | 0.995 |
| DVU_2505 | glmU | DVU_2505 | DVU_2668 | Cell cycle protein, ftsw/roda/spove family; Belongs to the SEDS family | Bifunctional n-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain | 0.514 |
| DVU_2505 | mraY | DVU_2505 | DVU_2507 | Cell cycle protein, ftsw/roda/spove family; Belongs to the SEDS family | Phospho-n-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan | 0.987 |
| DVU_2505 | murA | DVU_2505 | DVU_3258 | Cell cycle protein, ftsw/roda/spove family; Belongs to the SEDS family | Udp-n-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine | 0.845 |
| DVU_2505 | murB | DVU_2505 | DVU_2502 | Cell cycle protein, ftsw/roda/spove family; Belongs to the SEDS family | Udp-n-acetylenolpyruvoylglucosamine reductase; Cell wall formation | 0.966 |
| DVU_2505 | murC | DVU_2505 | DVU_2503 | Cell cycle protein, ftsw/roda/spove family; Belongs to the SEDS family | Udp-n-acetylmuramate--l-alanine ligase; Cell wall formation | 0.986 |
| DVU_2505 | murD | DVU_2505 | DVU_2506 | Cell cycle protein, ftsw/roda/spove family; Belongs to the SEDS family | Udp-n-acetylmuramoylalanine--d-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) | 0.984 |
| DVU_2510 | DVU_2505 | DVU_2510 | DVU_2505 | Cell division protein ftsi (penicillin-binding protein 3); Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717 | Cell cycle protein, ftsw/roda/spove family; Belongs to the SEDS family | 0.995 |
| DVU_2510 | glmU | DVU_2510 | DVU_2668 | Cell division protein ftsi (penicillin-binding protein 3); Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717 | Bifunctional n-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain | 0.470 |
| DVU_2510 | mraY | DVU_2510 | DVU_2507 | Cell division protein ftsi (penicillin-binding protein 3); Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717 | Phospho-n-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan | 0.964 |
| DVU_2510 | murA | DVU_2510 | DVU_3258 | Cell division protein ftsi (penicillin-binding protein 3); Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717 | Udp-n-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine | 0.845 |
| DVU_2510 | murB | DVU_2510 | DVU_2502 | Cell division protein ftsi (penicillin-binding protein 3); Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717 | Udp-n-acetylenolpyruvoylglucosamine reductase; Cell wall formation | 0.919 |
| DVU_2510 | murC | DVU_2510 | DVU_2503 | Cell division protein ftsi (penicillin-binding protein 3); Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717 | Udp-n-acetylmuramate--l-alanine ligase; Cell wall formation | 0.976 |
| DVU_2510 | murD | DVU_2510 | DVU_2506 | Cell division protein ftsi (penicillin-binding protein 3); Penicillin-binding protein; Identified by similarity to SP:P11882; match to protein family HMM PF00905; match to protein family HMM PF03717 | Udp-n-acetylmuramoylalanine--d-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) | 0.975 |
| DVU_3176 | DVU_0319 | DVU_3176 | DVU_0319 | Udp-n-acetyl-d-glucosamine/udp-n-acetyl-d-galactosamine dehydrogenase; Identified by similarity to SP:P39861; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721 | Udp-n-acetylglucosamine/udp-n-acetylgalactosamine 4-epimerase; Identified by similarity to GP:20560072; match to protein family HMM PF01370 | 0.995 |
| DVU_3176 | glmU | DVU_3176 | DVU_2668 | Udp-n-acetyl-d-glucosamine/udp-n-acetyl-d-galactosamine dehydrogenase; Identified by similarity to SP:P39861; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721 | Bifunctional n-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain | 0.906 |
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