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DVU_3268 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3268" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_3268Uncharacterized protein; Identified by similarity to OMNI-NTL01MK0862 (420 aa)    
Predicted Functional Partners:
DVU_3267
Uncharacterized protein; Identified by Glimmer2; putative (203 aa)
              0.606
DVU_3269
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF02518; match to protein family HMM TIGR00229 (839 aa)
              0.534
DVU_2939
Uncharacterized protein; Identified by similarity to OMNI-NTL01TE1240 (295 aa)
 
          0.531
DVU_2772
Uncharacterized protein; Identified by similarity to OMNI-NTL01TE2295 (440 aa)
   
          0.513
DVU_1062
Uncharacterized protein; Identified by similarity to OMNI-NTL01SS02998 (256 aa)
 
          0.512
DVU_3266
annotation not available (263 aa)
              0.454
DVU_3036
Uncharacterized protein; Identified by similarity to OMNI-NTL01SS01164; match to protein family HMM PF04015 (330 aa)
   
          0.420
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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