STRINGSTRING
DVU_3272 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3272" - TPR domain protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_3272TPR domain protein; Identified by match to protein family HMM PF00515 (207 aa)    
Predicted Functional Partners:
DVU_3274
Uncharacterized protein; Identified by Glimmer2; putative (222 aa)
 
          0.937
DVU_3273
Uncharacterized protein; Identified by similarity to GP-944973 (130 aa)
 
     
  0.934
DVU_3275
Uncharacterized protein; Identified by Glimmer2; putative (46 aa)
              0.845
DVU_0318
TPR domain protein; Identified by match to protein family HMM PF00515 (187 aa)
       
      0.838
DVU_3276
Identified by similarity to SP-P08813; match to protein family HMM PF00037 (62 aa)
 
          0.736
DVU_2125
TPR domain protein; Identified by match to protein family HMM PF00515 (371 aa)
 
       
0.708
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity; Belongs to the heat shock protein 90 family (637 aa)
   
 
  0.592
DVU_3278
Peptidase/PDZ domain protein; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595 (518 aa)
 
 
 
  0.579
DVU_0298
Uncharacterized protein; Identified by Glimmer2; putative (261 aa)
 
      0.569
DVU_2579
TPR domain protein; Identified by match to protein family HMM PF00515 (209 aa)
   
          0.567
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (24%) [HD]