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DVU_3278 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3278" - Peptidase/PDZ domain protein in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_3278Peptidase/PDZ domain protein; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595 (518 aa)    
Predicted Functional Partners:
DVU_3277
Uncharacterized protein; Identified by Glimmer2; putative (32 aa)
              0.845
DVU_1422
Identified by match to protein family HMM PF00691 (357 aa)
   
 
  0.635
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family (201 aa)
   
 
  0.633
DVU_3276
Identified by similarity to SP-P08813; match to protein family HMM PF00037 (62 aa)
              0.609
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5’-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) (357 aa)
   
        0.597
DVU_3104
Peptidoglycan-associated lipoprotein, putative; Identified by similarity to SP-P07176; match to protein family HMM PF00691; Belongs to the ompA family (167 aa)
     
 
  0.580
DVU_3272
TPR domain protein; Identified by match to protein family HMM PF00515 (207 aa)
 
 
 
  0.579
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
 
   
  0.554
DVU_1219
Uncharacterized protein; Identified by similarity to GP-6724082 (731 aa)
     
 
  0.550
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family (497 aa)
     
 
  0.547
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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