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DVU_3330 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3330" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_3330Uncharacterized protein; Identified by similarity to OMNI-NTL01TE1332 (91 aa)    
Predicted Functional Partners:
DVU_3332
Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525 (606 aa)
              0.695
DVU_3333
Uncharacterized protein; Identified by Glimmer2; putative (152 aa)
              0.644
DVU_3329
Uncharacterized protein; Identified by Glimmer2; putative (41 aa)
              0.617
DVU_3328
Uncharacterized protein; Identified by Glimmer2; putative (109 aa)
              0.617
DVU_3331
Uncharacterized protein; Identified by Glimmer2; putative (127 aa)
              0.616
DVU_2215
Identified by match to protein family HMM PF00076 (89 aa)
           
  0.533
DVU_2103
Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991 (287 aa)
           
  0.530
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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