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DVU_3352 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_3352" - annotation not available in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_3352annotation not available (189 aa)    
Predicted Functional Partners:
coaBC
Coenzyme A biosynthesis bifunctional protein CoaBC; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4’-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4’-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family (404 aa)
              0.886
DVU_0810
Uncharacterized protein; Identified by Glimmer2; putative (686 aa)
   
          0.754
DVU_1435
Membrane protein, putative; Identified by similarity to OMNI-NTL03PA01784 (394 aa)
   
          0.727
DVU_0843
Uncharacterized protein; Identified by Glimmer2; putative (394 aa)
   
          0.709
DVU_0273
Uncharacterized protein; Identified by similarity to GP-21899254 (505 aa)
   
          0.707
DVU_3190
Uncharacterized protein; Identified by Glimmer2; putative (555 aa)
   
          0.698
DVU_0797
Uncharacterized protein; Identified by similarity to GP-21899254 (476 aa)
   
          0.697
DVU_0859
Uncharacterized protein; Identified by Glimmer2; putative (491 aa)
   
          0.693
DVU_0799
Uncharacterized protein; Identified by similarity to GP-21899254 (466 aa)
   
          0.691
queA
S-adenosylmethionine-tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (371 aa)
              0.690
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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