STRINGSTRING
dgkA protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"dgkA" - Diacylglycerol kinase in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dgkADiacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid (124 aa)    
Predicted Functional Partners:
DVU_3376
Identified by match to protein family HMM PF00884 (524 aa)
   
        0.932
DVU_1688
1-acyl-sn-glycerol-3-phosphate acyltransferase, putative; Identified by match to protein family HMM PF01553 (269 aa)
       
  0.915
cdsA
Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148; Belongs to the CDS family (268 aa)
     
  0.910
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Identified by similarity to SP-P37606; match to protein family HMM PF01210 (330 aa)
     
  0.841
DVU_3132
Glycerol-3-phosphate dehydrogenase; Identified by similarity to SP-P18158; match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family (546 aa)
       
    0.805
DVU_2673
Anaerobic glycerol-3-phosphate dehydrogenase, subunit A, truncation; Identified by similarity to SP-P13032; match to protein family HMM PF01266 (389 aa)
       
    0.805
DVU_1940
Anaerobic glycerol-3-phosphate dehydrogenase, A subunit, putative; Identified by similarity to SP-P13032; match to protein family HMM PF01266 (516 aa)
       
    0.805
DVU_1939
Anaerobic glycerol-3-phosphate dehydrogenase, B subunit, putative; Identified by similarity to SP-P13033 (427 aa)
         
    0.800
DVU_1563
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229 (1039 aa)
   
   
  0.647
ybeY
Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (162 aa)
         
  0.590
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (16%) [HD]