Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0624 | zraP | DVU_0624 | DVU_3384 | NapC/NirT cytochrome c family protein; Electron donor subunit of the cytochrome c nitrite reductase holocomplex NrfHA. Acquires electrons from the menaquinone pool and mediates their transfer to the catalytic subunit NrfA in an anaerobic respiratory process of nitrite. The other biological function of the NrfHA holocomplex is to detoxify nitrite. This function is essential for the survival of this organism as it enables it to overcome inhibition by nitrite, which is produced by other organisms living in the same environment (Probable). Belongs to the NapC/NirT/NrfH family. | Zinc resistance-associated protein; Identified by similarity to SP:P32682; Belongs to the ZraP family. | 0.402 |
| DVU_3383 | zraP | DVU_3383 | DVU_3384 | Hypothetical protein; Identified by Glimmer2; putative. | Zinc resistance-associated protein; Identified by similarity to SP:P32682; Belongs to the ZraP family. | 0.504 |
| infA-2 | zraP | DVU_2216 | DVU_3384 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Zinc resistance-associated protein; Identified by similarity to SP:P32682; Belongs to the ZraP family. | 0.438 |
| zraP | DVU_0624 | DVU_3384 | DVU_0624 | Zinc resistance-associated protein; Identified by similarity to SP:P32682; Belongs to the ZraP family. | NapC/NirT cytochrome c family protein; Electron donor subunit of the cytochrome c nitrite reductase holocomplex NrfHA. Acquires electrons from the menaquinone pool and mediates their transfer to the catalytic subunit NrfA in an anaerobic respiratory process of nitrite. The other biological function of the NrfHA holocomplex is to detoxify nitrite. This function is essential for the survival of this organism as it enables it to overcome inhibition by nitrite, which is produced by other organisms living in the same environment (Probable). Belongs to the NapC/NirT/NrfH family. | 0.402 |
| zraP | DVU_3383 | DVU_3384 | DVU_3383 | Zinc resistance-associated protein; Identified by similarity to SP:P32682; Belongs to the ZraP family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.504 |
| zraP | infA-2 | DVU_3384 | DVU_2216 | Zinc resistance-associated protein; Identified by similarity to SP:P32682; Belongs to the ZraP family. | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.438 |