STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zraPZinc resistance-associated protein; Belongs to the ZraP family (173 aa)    
Predicted Functional Partners:
DVU_0859
Uncharacterized protein; Identified by Glimmer2; putative
  
     0.736
DVU_0682
annotation not available
  
     0.734
DVU_0273
Conserved hypothetical protein; Uncharacterized protein; Identified by similarity to GP:21899254
  
     0.719
DVU_1952
Uncharacterized protein; Identified by Glimmer2; putative
  
     0.718
DVU_0602
Uncharacterized protein; Identified by Glimmer2; putative
  
     0.716
DVU_1194
Dna polymerase iii subunit delta; Uncharacterized protein; Identified by Glimmer2; putative
  
     0.714
DVU_1045
Uncharacterized protein; Identified by Glimmer2; putative
  
    0.710
DVU_3190
Uncharacterized protein; Identified by Glimmer2; putative
  
     0.706
DVU_1842
annotation not available
  
     0.703
DVU_2223
Uncharacterized protein; Identified by Glimmer2; putative
  
     0.703
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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