STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR61017.1PFAM: Protein of unknown function (DUF3375). (499 aa)    
Predicted Functional Partners:
EHR61015.1
Hypothetical protein.
 
   0.998
EHR61016.1
Hypothetical protein.
 
 
   0.998
EHR61014.1
Protein of unknown function (DUF2220); PFAM: Uncharacterized protein conserved in bacteria N-term (DUF3322); Uncharacterized protein conserved in bacteria C-term(DUF2220).
 
   
 0.964
EHR59805.1
Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.942
EHR63118.1
Hypothetical protein.
   
 
 0.889
EHR63580.1
Hypothetical protein.
   
 
 0.889
EHR63267.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.687
EHR63656.1
PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
    
  0.673
EHR63266.1
Hypothetical protein; PFAM: Roadblock/LC7 domain.
  
     0.652
EHR63265.1
PFAM: Protein of unknown function (DUF742).
  
     0.628
Your Current Organism:
Saccharomonospora cyanea
NCBI taxonomy Id: 882082
Other names: S. cyanea NA-134, Saccharomonospora cyanea DSM 44106, Saccharomonospora cyanea NA-134, Saccharomonospora cyanea str. NA-134, Saccharomonospora cyanea strain NA-134
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.