STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR48642.1Arabinose efflux permease family protein; PFAM: Bacterial protein of unknown function (DUF894). (395 aa)    
Predicted Functional Partners:
EHR50765.1
Sugar phosphate permease; PFAM: Bacterial protein of unknown function (DUF894).
  
     0.602
EHR51086.1
Putative acetyltransferase.
   
    0.541
EHR51877.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.498
EHR52430.1
Non-ribosomal peptide synthase; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
  
 
 0.498
EHR52767.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
  
     0.488
EHR51725.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat.
  
     0.447
EHR48643.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1025).
       0.433
EHR53875.1
Arabinose efflux permease family protein; PFAM: Bacterial protein of unknown function (DUF894).
  
     0.432
EHR48644.1
Hypothetical protein.
       0.430
EHR51354.1
Arabinose efflux permease family protein; PFAM: Bacterial protein of unknown function (DUF894).
  
     0.426
Your Current Organism:
Saccharomonospora marina
NCBI taxonomy Id: 882083
Other names: S. marina XMU15, Saccharomonospora marina DSM 45390, Saccharomonospora marina XMU15, Saccharomonospora marina str. XMU15, Saccharomonospora marina strain XMU15
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