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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHR49934.1Methyltransferase family protein; PFAM: Methyltransferase domain. (206 aa)    
Predicted Functional Partners:
EHR52405.1
Hypothetical protein.
   
   0.787
EHR49503.1
PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain; TIGRFAM: cobaltochelatase subunit.
  
 0.710
gcvP
Glycine dehydrogenase, decarboxylating; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.677
cysC-2
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
    
 0.658
EHR51880.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
  
 0.618
EHR51020.1
Hypothetical protein.
  
 
 0.601
EHR49936.1
Hypothetical protein.
       0.560
EHR49935.1
Folylpolyglutamate synthase/dihydrofolate synthase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase.
       0.559
EHR52430.1
Non-ribosomal peptide synthase; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
  
 0.508
EHR53879.1
Hypothetical protein.
  
     0.435
Your Current Organism:
Saccharomonospora marina
NCBI taxonomy Id: 882083
Other names: S. marina XMU15, Saccharomonospora marina DSM 45390, Saccharomonospora marina XMU15, Saccharomonospora marina str. XMU15, Saccharomonospora marina strain XMU15
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