STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000231035_01234Unannotated protein. (250 aa)    
Predicted Functional Partners:
GCA_000231035_01233
Unannotated protein.
 
 0.998
GCA_000231035_01250
Unannotated protein.
 
 
 0.998
GCA_000231035_01229
Unannotated protein.
 
 
 0.997
GCA_000231035_01230
Unannotated protein.
 
 
 0.993
GCA_000231035_01254
Unannotated protein.
 
 
 0.987
GCA_000231035_03512
Unannotated protein.
 
  
 0.956
GCA_000231035_01252
Unannotated protein.
 
   
 0.927
GCA_000231035_01571
Unannotated protein.
  
 
 0.920
GCA_000231035_04642
Unannotated protein.
  
 
 0.888
GCA_000231035_01227
Unannotated protein.
 
   
 0.834
Your Current Organism:
Saccharomonospora paurometabolica
NCBI taxonomy Id: 882084
Other names: S. paurometabolica YIM 90007, Saccharomonospora paurometabolica DSM 44619, Saccharomonospora paurometabolica YIM 90007, Saccharomonospora paurometabolica str. YIM 90007, Saccharomonospora paurometabolica strain YIM 90007
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.