STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383795_01024Unannotated protein. (206 aa)    
Predicted Functional Partners:
GCA_000383795_02629
Unannotated protein.
 
 0.991
GCA_000383795_01543
Unannotated protein.
 
 0.967
GCA_000383795_03822
Unannotated protein.
 
 0.964
GCA_000383795_00677
Unannotated protein.
 
 
 0.851
GCA_000383795_02311
Unannotated protein.
  
  
 0.836
GCA_000383795_03022
Unannotated protein.
  
  
 0.833
GCA_000383795_02633
Unannotated protein.
  
 
 0.828
GCA_000383795_02631
Unannotated protein.
 
  
 0.801
GCA_000383795_02309
Unannotated protein.
 
 
  0.755
GCA_000383795_03277
Unannotated protein.
  
 
  0.755
Your Current Organism:
Saccharomonospora saliphila
NCBI taxonomy Id: 882085
Other names: S. saliphila YIM 90502, Saccharomonospora saliphila DSM 45087, Saccharomonospora saliphila YIM 90502, Saccharomonospora saliphila str. YIM 90502, Saccharomonospora saliphila strain YIM 90502, Saccharomonospora sp. YIM 90592
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.