STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383795_02655Unannotated protein. (85 aa)    
Predicted Functional Partners:
GCA_000383795_02910
Unannotated protein.
    
   0.774
GCA_000383795_02260
Unannotated protein.
    
  0.709
GCA_000383795_03433
Unannotated protein.
    
  0.709
GCA_000383795_01551
Unannotated protein.
     
 0.676
GCA_000383795_02155
Unannotated protein.
    
  0.675
GCA_000383795_02834
Unannotated protein.
 
    0.623
GCA_000383795_02654
Unannotated protein.
 
     0.412
GCA_000383795_00405
Unannotated protein.
  
     0.403
GCA_000383795_02864
Unannotated protein.
    
 
 0.400
Your Current Organism:
Saccharomonospora saliphila
NCBI taxonomy Id: 882085
Other names: S. saliphila YIM 90502, Saccharomonospora saliphila DSM 45087, Saccharomonospora saliphila YIM 90502, Saccharomonospora saliphila str. YIM 90502, Saccharomonospora saliphila strain YIM 90502, Saccharomonospora sp. YIM 90592
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.