STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383795_03010Unannotated protein. (268 aa)    
Predicted Functional Partners:
GCA_000383795_03009
Unannotated protein.
 
 0.999
GCA_000383795_02431
Unannotated protein.
  
 0.991
GCA_000383795_03011
Unannotated protein.
 
  
 0.955
GCA_000383795_00677
Unannotated protein.
 
 0.794
GCA_000383795_02631
Unannotated protein.
 
  
 0.736
GCA_000383795_02616
Unannotated protein.
   
    0.699
GCA_000383795_03002
Unannotated protein.
     
 0.559
GCA_000383795_00471
Unannotated protein.
   
    0.550
GCA_000383795_02817
Unannotated protein.
   
    0.550
GCA_000383795_00720
Unannotated protein.
  
    0.542
Your Current Organism:
Saccharomonospora saliphila
NCBI taxonomy Id: 882085
Other names: S. saliphila YIM 90502, Saccharomonospora saliphila DSM 45087, Saccharomonospora saliphila YIM 90502, Saccharomonospora saliphila str. YIM 90502, Saccharomonospora saliphila strain YIM 90502, Saccharomonospora sp. YIM 90592
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.