STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EID55988.1Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family. (345 aa)    
Predicted Functional Partners:
EID54530.1
Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix.
   
    0.819
EID52488.1
PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain; manually curated.
   
    0.817
cobB
NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.815
EID55989.1
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; PFAM: DJ-1/PfpI family.
 
  
 
0.772
EID55531.1
Transcriptional regulator; PFAM: MarR family.
   
    0.764
EID52506.1
Putative transcriptional regulator; PFAM: HTH domain.
   
    0.763
EID54621.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
   
    0.761
EID54627.1
Hypothetical protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
  
    0.760
EID54987.1
Mn-dependent transcriptional regulator; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.
   
    0.757
EID56234.1
Transcriptional regulator; PFAM: IclR helix-turn-helix domain; AsnC family.
  
    0.752
Your Current Organism:
Saccharomonospora xinjiangensis
NCBI taxonomy Id: 882086
Other names: S. xinjiangensis XJ-54, Saccharomonospora xinjiangensis DSM 44391, Saccharomonospora xinjiangensis XJ-54, Saccharomonospora xinjiangensis str. XJ-54, Saccharomonospora xinjiangensis strain XJ-54
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