STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000235685_00074Unannotated protein. (302 aa)    
Predicted Functional Partners:
GCA_000235685_00393
Unannotated protein.
  
  
 0.809
GCA_000235685_00073
Unannotated protein.
 
     0.639
GCA_000235685_01126
Unannotated protein.
  
 
  0.612
GCA_000235685_00616
Unannotated protein.
     
 0.534
GCA_000235685_00075
Unannotated protein.
       0.532
GCA_000235685_00323
Unannotated protein.
   
  
 0.458
GCA_000235685_00606
Unannotated protein.
 
  
 0.456
GCA_000235685_00361
Unannotated protein.
     
 0.428
GCA_000235685_01844
Unannotated protein.
  
 
   0.427
GCA_000235685_01108
Unannotated protein.
     
 0.426
Your Current Organism:
Methanolinea tarda
NCBI taxonomy Id: 882090
Other names: M. tarda NOBI-1, Methanolinea tarda DSM 16494, Methanolinea tarda NOBI-1, Methanolinea tarda str. NOBI-1, Methanolinea tarda strain NOBI-1, methanogenic archaeon NOBI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.